Galaxy workflows Sample Clauses

Galaxy workflows. Most bioinformatics analyses involve multiple steps such as data pre-­‐processing, statistical analysis, and visualisation, with each step involving many separate operations. The steps can be captured in a pipeline or workflow. Reusable workflows describing the sequence of component computational steps necessary for an analysis are important in bioinformatics as they facilitate reproducibility of analyses. They also insulate a non-­‐bioinformatics end user from the details of the component methodological processes involved in getting the final output. The use of Galaxy workflows (Xxxxx et al, 2016) to analyse data stored in the tranSMART platform has been investigated. A marker selection workflow, for example, can capture all the steps required in identifying genes differentially expressed between disease samples and healthy controls, from transcriptomics data sets. The workflow of a pipeline can specify the data re-­‐processing steps such as quality control, normalisation as well as the statistical tests to be used and various steps in the workflow can be configured.
Sample 1
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